No need to rebuild that hatch. Simply screw a 1/8 x 1 1/2" strip of aluminum to the bottom of your hatch. Not only will you cover that gap, you will also have a nice drip edge to divert water away from your galley floor.
As you can see, I had to relieve mine a bit to accomodate the hatch handle. Be sure to use plenty of caulk. Finally, I put a thick weather strip right up against the drip edge along the botom of the hatch.